5.4 Root induction strategies 

Here’s a professional, course-ready section on Root Induction Strategies for COPI’s Biotechnological Propagation of Agarwood Course, suitable for SOP manuals, lab guides, and training materials:


Root Induction Strategies in Aquilaria Tissue Culture


1. Overview

Root induction is the process of initiating adventitious or lateral roots from regenerated shoots, which is essential for:

  • Successful plantlet establishment during acclimatization
  • Maintenance of high survival rates in nursery and field
  • Completion of the in vitro propagation cycle

Optimized rooting ensures vigorous, transplantable Aquilaria plantlets capable of long-term growth and resin production.


2. Explant Selection for Rooting

Explant TypeRecommended UseNotes
Regenerated shootsIn vitro rooted shootsOptimal 2–5 cm in length, 2–3 nodes
MicrocuttingsShoot segments from multiplication culturesHigher rooting efficiency with young tissue
Callus-derived shootsIndirectly regenerated shootsMay require longer rooting periods and auxin optimization

3. Basal Medium and Additives

ParameterRecommendation
Basal mediumHalf-strength MS or Customized Agarwood Medium (CAM)
Carbon source2–3% sucrose
Gelling agentAgar 0.6–0.8% or Gelrite 0.2–0.3%
pH5.6–5.8 before autoclaving
AdditivesActivated charcoal (0.1–0.3%) to reduce phenolic oxidation

4. Plant Growth Regulators (PGRs) for Rooting

AuxinTypical ConcentrationEffect
Indole-3-butyric acid (IBA)0.5–2.0 mg/LPromotes adventitious root formation; widely used for woody species
Naphthaleneacetic acid (NAA)0.5–2.0 mg/LStimulates root initiation; enhances root number and length
Indole-3-acetic acid (IAA)0.1–1.0 mg/LNatural auxin; less stable, moderate rooting efficiency

Key Notes:

  • Auxin concentration is critical: low levels may reduce rooting; high levels may cause callus formation or root malformations.
  • Short-term pulse treatment with high auxin can enhance rooting without callus proliferation.
  • Combination of auxins with GA₃ is generally avoided to prevent elongation at the expense of rooting.

5. Environmental Conditions

ParameterRecommended Range
Temperature25 ± 2°C
LightLow light (10–20 µmol m⁻² s⁻¹) or dim photoperiod to reduce stress
Humidity70–80% during in vitro rooting
Subculture IntervalEvery 3–4 weeks or until roots reach 2–3 cm
MonitoringDaily for contamination; weekly for root initiation and growth

6. Rooting Protocol Workflow

  1. Explant Preparation
    • Excise shoots of 2–5 cm with 2–3 nodes
    • Ensure explants are free from hyperhydricity or necrotic tissue
  2. Medium Preparation
    • Use half-strength MS or CAM with optimized auxin concentration
    • Optional: add activated charcoal to reduce phenolic oxidation
  3. Culture Initiation
    • Insert shoot base into medium (1–2 cm deep)
    • Orient shoots upright for optimal root formation
  4. Incubation
    • Maintain under controlled light, temperature, and humidity
    • Monitor root initiation (1–3 weeks depending on explant type)
  5. Root Elongation
    • Transfer shoots to fresh medium if required for further root development
    • Avoid high auxin levels during elongation phase
  6. Documentation
    • Record rooting percentage, number of roots per shoot, root length, and morphology

7. Troubleshooting Common Rooting Problems

ProblemLikely CauseCorrective Action
No root formationLow auxin, poor explant vigorIncrease IBA/NAA concentration, use younger shoots
Excessive callus at baseHigh auxinReduce auxin concentration, short-term pulse treatment
Thin or weak rootsInadequate medium strength or poor PGR balanceUse half-strength medium, optimize auxin ratio
Root browning or necrosisPhenolic oxidationAdd activated charcoal, frequent subculture, reduce light stress
Hyperhydric rootsHigh cytokinin carryoverUse cytokinin-free rooting medium

8. COPI Lab Best Practices

  • Use vigorous, healthy shoots for rooting
  • Optimize auxin type and concentration per Aquilaria species and explant
  • Maintain high humidity and low light to reduce stress
  • Document rooting efficiency, root morphology, and explant origin for traceability
  • Avoid excessive subculture that may lead to root inhibition or callus formation

9. Course-Ready Key Statement

Successful root induction in Aquilaria tissue culture depends on explant vigor, optimized auxin application, and controlled environmental conditions. Efficient rooting ensures robust plantlets ready for acclimatization, maximizing survival and downstream resin production potential.


I can next:

  • Create a visual infographic showing root induction workflow from regenerated shoot → auxin treatment → rooting → elongation
  • Include recommended PGRs, concentrations, timing, and troubleshooting tips
  • Integrate this into Module 4 of your course manual

Do you want me to create the infographic version next?